PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK32753.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 299aa    MW: 32379.7 Da    PI: 10.2062
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK32753.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.3e-32223280359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+a+d++++++tYeg+Hnh+
  KFK32753.1 223 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAADDGSMLIVTYEGDHNHS 280
                 99************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.0E-14173219IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.6E-33208280IPR003657WRKY domain
PROSITE profilePS5081130.354216282IPR003657WRKY domain
SuperFamilySSF1182906.93E-27219281IPR003657WRKY domain
SMARTSM007741.0E-37221281IPR003657WRKY domain
PfamPF031063.2E-27223279IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MAVELMTRNY ISSVGADSFA VQEAAASGLK SMENFIGLMS RETLNSDQPS SSSSAAVSAA  60
DLELARNTTA DAAVSKFKRV ISLLDRTRTG HARFRRAPVI SQEPKATPFQ APLPPPPMMI  120
RKGSFSSSMK TIDFSSLSSV TTESEHEKKH HRPSETAPFM SQTTVSSFSK SSKRKCNSAN  180
LLAGKCSSAS SGRCHCSKKR KMKEKRVTRV PAISAKMSDV PPDDYSWRKY GQKPIKGSPH  240
PRGYYKCSSV RGCPARKHVE RAADDGSMLI VTYEGDHNHS LSAADLAGDA VADLILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22208281173WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00275DAPTransfer from AT2G23320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006294625.11e-171hypothetical protein CARUB_v10023662mg
RefseqXP_010429281.11e-171PREDICTED: probable WRKY transcription factor 15
SwissprotO221761e-173WRK15_ARATH; Probable WRKY transcription factor 15
TrEMBLA0A087GSA10.0A0A087GSA1_ARAAL; Uncharacterized protein
STRINGAT2G23320.11e-170(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17152887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-152WRKY DNA-binding protein 15